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Update to deal with issues for convolution and drift (ready for review) - #309

Merged

lcnature merged 19 commits into

brainiak:masterfrom

CameronTEllis:fmrisim_drift

Jan 13, 2018

Merged

Update to deal with issues for convolution and drift (ready for review)#309
lcnature merged 19 commits into
brainiak:masterfrom
CameronTEllis:fmrisim_drift

Commits on Dec 10, 2017
- Changed the order of downsampling in convolve_hrf to accelerate computation. Changed drift to default to cosine functions
  CameronTEllis
  committed
  d21b386
- Extended testing to protect against the HRF being miscalculated/convolved incorrectly
  CameronTEllis
  committed
  fcfe125
Commits on Dec 11, 2017
- PEP errors
  CameronTEllis
  committed
  86044bf
Commits on Dec 12, 2017
- Error
  CameronTEllis
  committed
  cc778da
Commits on Dec 22, 2017
- In response to Mingbo's review: now downsample after convolution (as before) in convolve_hrf, changed some defaults and updated the test. Also added some more plots to the example
  CameronTEllis
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  6fabc57
- PEP error
  CameronTEllis
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  c0c95b7
- Test error
  CameronTEllis
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  3e83f3b
Commits on Jan 3, 2018
- Merge branch 'master' into fmrisim_drift
  lcnature
  authored
  42f5abd
Commits on Jan 4, 2018
- Updates for drift pull request
  CameronTEllis
  committed
  fead952
- Merge branch 'fmrisim_drift' of https://github.com/CameronTEllis/BrainIAK into fmrisim_drift
  CameronTEllis
  committed
  07b5fbd
Commits on Jan 8, 2018
- Changed raise to warning for temporal precision error
  CameronTEllis
  committed
  b00aa12
Commits on Jan 9, 2018
- Made the evoked activity proportional to the mean activity of the voxel
  CameronTEllis
  committed
  c810e97
Commits on Jan 10, 2018
- Downsample the HRF rather average, as we are doing slice time correction
  CameronTEllis
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  ad70aa1
- Updated gen_design to solve an issue resulting from changes to convolve_hrf
  CameronTEllis
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  38b2fdb
- Updated for test
  CameronTEllis
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  63795d2
- New changes to convolve hrf add a bit more slop to some tests for gen_design which need to be relaxed
  CameronTEllis
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  56d949b
- Error in the directionality of the warning for generate_stimfunction
  CameronTEllis
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  435a5d9
Commits on Jan 12, 2018
- Updated test
  CameronTEllis
  committed
  45e7b93
- Merge branch 'master' into fmrisim_drift
  lcnature
  authored
  80fd00b

Commits

Commits on Dec 10, 2017

Commits on Dec 11, 2017

Commits on Dec 12, 2017

Commits on Dec 22, 2017

Commits on Jan 3, 2018

Commits on Jan 4, 2018

Commits on Jan 8, 2018

Commits on Jan 9, 2018

Commits on Jan 10, 2018

Commits on Jan 12, 2018